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2025                                        

Lab members are shown in bold

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Woodward, M., Dallaire, A., Paszkowski, U., Kokkoris, V. Is genetic manipulation of arbuscular mycorrhizal fungi possible? Trends in Microbiology, https://doi.org/10.1016/j.tim.2025.06.002  

 

Cargill, R., Shimizu. S. T., Kiers E. T., Kokkoris, V. Cellular Anatomy of Arbuscular Mycorrhizal Fungi Current Biology,

https://doi.org/10.1016/j.cub.2025.03.053 

 

Oyarte Galvez, L., Bisot, C., Bourrianne, P., Cargill, R., Klein, M., van Son, M., van Krugten, J., Caldas, V., Clerc, T., Lin, K., Kahane, F., van Staalduine, S.,  Stewart, J. D., Terry, V., Turcu, B., van Otterdijk, S., Babu, A., Kamp, M., Seynen, M., Steenbeek, B., Zomerdijk, J., Tutucci, E., Sheldrake, M.,  Godin, C., Kokkoris, V., Stone,H. A., Kiers E. T., & Shimizu. S. T. A travelling-wave strategy for plant–fungal  trade. Nature,

https://doi.org/10.1038/s41586-025-08614-x 

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Antunes, P. M., Stürmer, L.S.,  Bever, D. J., Chagnon, PL.. Chaudhary, V. B., Deveautour, C., Fahey, C., Kokkoris, V., Lekberg, Y., Powell, R. J.,  Aguilar-Trigueros A. C., & Zhang H. Enhancing consistency in arbuscular mycorrhizal trait-based research to improve predictions of function. Mycorrhiza, https://doi.org/10.1007/s00572-025-01187-7 

​Oliveira, J. I. N., Lane, C., Mugambi, K., Yildirir, G., Nicol, A. M., Kokkoris, V., Banchini, C., Dadej, K., Dettman, J., Stefani, F., Corradi, N. Analyses of Transposable Elements in Arbuscular Mycorrhizal Fungi Support Evolutionary Parallels With Filamentous Plant Pathogens, Genome Biology & Evolution, https://doi.org/10.1093/gbe/evaf038 ​​​

2024

 

Sun, D., Rozmoš, M., Kokkoris, V.,  Kotianová, M., Hršelová, H., Bukovská, P., Faghihinia, M., Jansa, J. Gene expression signatures of mutualism and pathogenesis in flax roots. Frontiers in Plant Science, https://doi.org/10.1007/s00572-024-01154-8

 

da Costa Ribeiro Quintans, I.L.A., Vukicevich, E., Kokkoris, V., Packard, E., Adhikary, D., Hart, M.M., Deyholos. M.K. Biodiversity and Ecosystem-level Function of the Rhizosphere. Frontiers in Plant Science https://doi.org/10.3389/fpls.2024.1415082

Klein, M., Bisot, C., Oyarte Gálvez, L., Kokkoris, V., S Shimizu, T.S., Dong, L.,  Weedon, J. T., Bouwmeester, H., Kiers E. T., The potential of strigolactones to shift competitive dynamics among two Rhizophagus irregularis strains. Frontiers in Microbiology https://doi.org/10.3389/fmicb.2024.1470469 

2023

 

Kokkoris, V., Banchini, C., Paré, L., Abdellatif, L., Séguin, S., Hubbard, K., Findlay, W.,  Dalpé, Y., Dettman, J., Corradi, N., Stefani, F. Rhizophagus irregularis, the model fungus in arbuscular mycorrhiza research, forms dimorphic spores. New Phytologist, https://doi.org/10.1111/nph.19121

Terry, V., Kokkoris, V., Villeneuve-Laroche, M., Turcu, B., Chapman, K., Cornell, C., Zheng, Z., Stefani, F., Corradi, N. Mycorrhizal response of Solanum tuberosum to homokaryotic versus dikaryotic arbuscular mycorrhizal fungi. Mycorrhiza, https://doi.org/10.1007/s00572-023-01123-7  

 

Editorial: Marín, C., Bueno, G., Wang, J., Kokkoris, V. Biodiversity and Ecosystem-level Function of the Rhizosphere. Frontiers in Plant Science, https://doi.org/10.3389/fpls.2023.1278662 

Kokkoris V. and Corradi N. AMF genetics and the future of AMF applications. IMS Newsletter, VOL. 4 ISSUE 2, AUGUST 2023 

2022

 

Cornell, C., Kokkoris, V, Δ., Turcu, B., Dettman, J., Stefani, F., Corradi, N. The arbuscular mycorrhizal fungus Rhizophagus irregularis harmonizes nuclear dynamics in the presence of distinct abiotic factors. Fungal Genetics and Biology, https://doi.org/10.1016/j.fgb.2021.103639  

 

Wang, Y., Stajich, J., Kokkoris, V., Villeneuve-Laroche, M., Yildirir, G., Corradi, N., Early branching arbuscular mycorrhizal fungus Paraglomus occultum carries a small and repeat-poor genome compared to relatives in the Glomeromycotina. Microbial genomics, 10.1099/mgen.0.000810 

2021

Kokkoris, V., Chagnon, PL., Yildirir G., Clarke, K., Goh, D., MacLean, A., Dettman, J., Stefani, F., Corradi, N., Host identity influences nuclear dynamics in arbuscular mycorrhizal fungi. Current Biology, https://doi.org/10.1016/j.cub.2021.01.035

Kokkoris, V., Vukicevich, E., Thomsen, C., Richards, A., Hart, M.  Droplet digital PCR in environmental samples: challenges and best practices. Applied microbiology, https://doi.org/10.3390/applmicrobiol1010007

Serghi E.U., Kokkoris, Δ, V., Cornell C., Dettman J., Stefani F., Corradi N. Homo- and Dikaryons of the Arbuscular Mycorrhizal Fungus Rhizophagus irregularis Differ in Life History Strategy. Frontiers in Plant Science, https://doi.org/10.3389/fpls.2021.715377 

Cornell, C., Kokkoris, V., Richards, A., Horst, C., Rosa, D., Bennett, J., Hart, M. Do bioinoculants affect resident microbial communities? A meta-analysis. Frontiers in Agronomy, https://doi.org/10.3389/fagro.2021.753474

Martignoni, M., Garnier, J., Zhang, X., Rosa, D., Kokkoris, V., Tyson, R., Hart, M. Co-inoculation with arbuscular mycorrhizal fungi differing in carbon sink strength induces a synergistic effect in plant growth. Journal of Theoretical Biology, https://doi.org/10.1016/j.jtbi.2021.110859 

Thomsen, C., Loverock, B., Kokkoris, V., Bowen, P., Hart, M. Commercial arbuscular mycorrhizal fungal inoculant failed to establish in a vineyard despite priority advantage. PeerJ, 10.7717/peerj.11119

2020

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Kokkoris, V., Stefani, F., Dalpé, Y., Dettman, J., Corradi N. Nuclear Dynamics in the Arbuscular Mycorrhizal Fungi. Trends in plants science, https://doi.org/10.1016/j.tplants.2020.05.002 

Kokkoris, V., Antunes, P., Fahey, C., Fordyce, J., Kivlin, S., Lekberg, Y., Hart, M. Codependency between plant and arbuscular mycorrhizal fungal communities: what is the evidence? New Phytologist, https://doi.org/10.1111/nph.16676 

Yildirir, G., Malar, M., Kokkoris, V., Corradi, N. Parasexual and sexual reproduction in arbuscular mycorrhizal fungi: room for both. Trends in Microbiology, https://doi.org/10.1016/j.tim.2020.03.013 

Rosa, D., Ambrosini V., Brunetto G., Kokkoris V., Hart M., Ricachenevsky F., Pescador R. Lime protection for young vines exposed to copper toxicity. Water, Air, & Soil Pollution, https://doi.org/10.1007/s11270-020-04662-3

Rosa, D., Pogiatzis, A., Bowen, P., Kokkoris V., Richards, A., Hart, M. Performance and establishment of a commercial mycorrhizal inoculant in viticulture. Agriculture, https://doi.org/10.3390/agriculture10110539 

2019

 

Kokkoris, V., Li, Y., Hamel, C., Hanson, K., Hart, M. Site specificity in establishment of a commercial fungal inoculant. Science of The Total Environment, https://doi.org/10.1016/j.scitotenv.2019.01.100 

Kokkoris, V., Hart, M. The role of in vitro cultivation on symbiotic trait and function variation in a single species of arbuscular mycorrhizal fungus. Fungal Biology, https://doi.org/10.1016/j.funbio.2019.06.009 

Kokkoris, V., Massas, I., Polemis, E., Koutrotsios, G., Zervakis, G. Accumulation of heavy metals by wild edible mushrooms collected in the Athens metropolitan area (Greece) and associations with their respective soil substrates. Science of The Total Environment,  

https://doi.org/10.1016/j.scitotenv.2019.05.447 

Kokkoris, V., Miles, T., Hart, M. The role of in vitro cultivation on asymbiotic trait variation in a single species of arbuscular mycorrhizal fungus. Fungal Biology, https://doi.org/10.1016/j.funbio.2019.01.005

Kokkoris, V., Hamel, C., Hart, M. Mycorrhizal response of cultivars versus native plants. PLOS ONE, https://doi.org/10.1371/journal.pone.0221037 

Kokkoris, V., Pogiatzis, A., Hart, M. Contrasting common measures of AM fungal root colonization. Journal of Microbiological Methods, https://doi.org/10.1016/j.mimet.2019.105727

Kokkoris, V., Hart, M. In vitro propagation of arbuscular mycorrhizal fungi may drive fungal evolution. Frontiers in Microbiology, https://doi.org/10.3389/fmicb.2019.02420

Holland, T., Bowen, P., Kokkoris, V., Richards, A., Rosa, D., Hart, M. The effect of root pruning on beneficial root symbionts in grapevine rootstocks. Chemical and Biological Technologies in Agriculture, https://doi.org/10.1186/s40538-019-0159-y

Van der Heyde, M., L. K. Abbott, Catherine Gehring, Kokkoris V., Miranda M. Hart. Reconciling disparate responses to grazing in the arbuscular mycorrhizal symbiosis. Rhizosphere, https://doi.org/10.1016/j.rhisph.2019.100167 

Holland, T., Bowen, P., Kokkoris, V., Hart, M. Does inoculation with AM fungi reduce trunk disease in grapevine rootstocks? Horticulturae,

https://doi.org/10.3390/horticulturae5030061

2018

 

Egan, CP., Rummel, A., Kokkoris, V., Klironomos, J., Lekberg, Y., Hart, M. Using mock communities of arbuscular mycorrhizal fungi to evaluate fidelity associated with Illumina sequencing. Fungal Ecology, https://doi.org/10.1016/j.funeco.2018.01.004

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